comirva.util
Class PCACalculationThread

java.lang.Object
  extended by java.lang.Thread
      extended by comirva.util.PCACalculationThread
All Implemented Interfaces:
Runnable

public class PCACalculationThread
extends Thread

This class implements a thread for calculating a PCA. Since this may take a while, it would freeze the program if not executed as thread.


Nested Class Summary
 
Nested classes/interfaces inherited from class java.lang.Thread
Thread.State, Thread.UncaughtExceptionHandler
 
Field Summary
 
Fields inherited from class java.lang.Thread
MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY
 
Constructor Summary
PCACalculationThread(DataMatrix dm, PCAConfig pcaCfg)
          Creates a PCACalculationThread for training the SOM som which has already been initialized.
PCACalculationThread(DataMatrix dm, PCAConfig pcaCfg, JLabel sb, Workspace ws)
          Creates a PCACalculationThread for training the SOM som which has already been initialized.
 
Method Summary
 void run()
          This method is called when the thread is started.
 
Methods inherited from class java.lang.Thread
activeCount, checkAccess, countStackFrames, currentThread, destroy, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, start, stop, stop, suspend, toString, yield
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

PCACalculationThread

public PCACalculationThread(DataMatrix dm,
                            PCAConfig pcaCfg)
Creates a PCACalculationThread for training the SOM som which has already been initialized.

Parameters:
dm - a DataMatrix holding the input data
pcaCfg - a PCAConfig representing the configuration for the PCA-calculation

PCACalculationThread

public PCACalculationThread(DataMatrix dm,
                            PCAConfig pcaCfg,
                            JLabel sb,
                            Workspace ws)
Creates a PCACalculationThread for training the SOM som which has already been initialized.

Parameters:
dm - a DataMatrix holding the input data
pcaCfg - a PCAConfig representing the configuration for the PCA-calculation
sb - a JLabel representing the status bar of CoMIRVA's UI
ws - the Workspace of CoMIRVA (data matrices and meta-data vectors)
Method Detail

run

public void run()
This method is called when the thread is started. The PCA is initialized and trained and the user is informed when training is finished (if the status bar was specified).

Specified by:
run in interface Runnable
Overrides:
run in class Thread
See Also:
Runnable.run()